3/14/2023 0 Comments Paraview netcdfmpasreader![]() ![]() Will convert the rho and u fields at the 10th output into the netcdf file output_10.nc. (place index immediately after -i) If this option is not given, then all indices will be converted -n Sets the number of threads to use in conversion Large files will take a very long time to be read and converted, multiple threads helps to parallelize this usage: -n 4 spins2netcdf is not efficiently parallelized, so 4 processors is a suggested value If this option is not given, then a single processor is used (place field name immediately after -f) If this option is not given, then all fields will be converted -i Sets the indices to be converted Useful for only converting those outputs that are needed Usage: -i0 -i5 etc. f Sets the fields to be included in the netcdf file Useful for only selecting a few fields from many Usage: -frho -fu etc. If none of the following are used, then all fields for all indices will be converted serially. See Visualization for details.Ī variety of optional arguments are available which give further control over the use of spins2netcdf. When the netcdf file is initially loaded by Paraview or Visit, it will be plotted on a rectilinear grid and will require adjustment onto this new field. If the grid is mapped, then an additional field (zc) is saved as the correct vertical coordinates. ![]() To do this for all files and all output indices use, *.0) into a single netcdf file (output_0.nc). Spins2netcdf collects files of a common suffix (eg. It is suggested to request 4 tasks (cpus) to use make use of the weak parallelization of spins2netcdf. If running on Graham, the login nodes do not have sufficient memory for most jobs so you must log into a compute node with the salloc command. This way it is always run when you log in. To remember this (or rather have it automatically done for you) place the module load command in your. On Graham and Orca the module load command presented above in the installation must always be run before running spins2netcdf. ![]() Explicitly, the nf requires the following information: The current version of SPINS has case files which already uses a nf which satisfies this requirement. Spins2netcdf requires a nf in the directory storing the data files to be converted. ![]()
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